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Publications (20)      

1. Bass, David, Denis Tikhonenkov, R. Foster, P. Dyal, Jan Janouškovec, Patrick J. Keeling, M. Gardner, H. Hartikainen, Alexander P. Mylnikov & C. Berney. 2018 Rhizarian ‘Novel Clade 10’ Revealed as Abundant and Diverse Planktonic and Terrestrial Flagellates, including Aquavolon n. gen. Journal of Eukaryotic Microbiology.
2. Belyaev, Artem, Dmitry G. Zagumyonnyi, Alexander P. Mylnikov & Denis Tikhonenkov. 2022 The Morphology, Ultrastructure and Molecular Phylogeny of a New Soil-Dwelling Kinetoplastid Avlakibodo gracilis gen. et sp. nov. (Neobodonida; Kinetoplastea) Protist 173(4): 125885.
3. Cho, Anna, Denis Tikhonenkov, Elisabeth Hehenberger, Anna Karnkowska, Alexander P. Mylnikov & Patrick J. Keeling. 2022 Monophyly of Diverse Bigyromonadea and their Impact on Phylogenomic Relationships Within Stramenopiles Molecular Phylogenetics and Evolution 171.
4. Gawryluk, Ryan M. R., Denis Tikhonenkov, Elisabeth Hehenberger, Husnik Filip, Alexander P. Mylnikov & Patrick J. Keeling. 2019 Non-photosynthetic predators are sisters to red algae Nature 572: 240-243.
5. Hehenberger, Elisabeth, Denis Tikhonenkov, Martin Kolisko, Javier del Campo, Anton Esaulov, Alexander P. Mylnikov & Patrick J. Keeling. 2017 Novel freshwater predators reshape holozoan phylogeny and reveal the presence of a two-component signalling system in the ancestor of animals Current biology 27(13): 2043–2050.
6. Irwin, Nicholas A. T., Denis Tikhonenkov, Elisabeth Hehenberger, Alexander P. Mylnikov, Fabien Burki & Patrick J. Keeling. 2019 Phylogenomics supports the monophyly of the Cercozoa Molecular Phylogenetics and Evolution.
7. Janouškovec, Jan, Denis Tikhonenkov, Fabien Burki, A. Howe, Forest L. Rohwer, Alexander P. Mylnikov & Patrick J. Keeling. 2017 A new lineage of eukaryotes illuminates early mitochondrial genome reduction Current Biology 27(23): 3717-3724.
8. Kirby, William A., Denis Tikhonenkov, Alexander P. Mylnikov, Jan Janouškovec, Gordon Lax & Alastair G. B. Simpson. 2015 Characterization of Tulamoeba bucina n. sp., an Extremely Halotolerant Amoeboflagellate Heterolobosean Belonging to the Tulamoeba–Pleurostomum Clade (Tulamoebidae n. fam.) Journal of Eukaryotic Microbiology 62(2): 227-38.
9. Prokina, Kristina, Dmitry G. Zagumyonnyi & Alexander P. Mylnikov. 2019 MARINE CENTROHELID HELIOZOANS (CENTROPLASTHELIDA FEBVRE-CHEVALIER ET FEBVRE, 1984) FROM BAYS OF SEVASTOPOL (THE BLACK SEA SHORE) Russian Journal of Marine Biology 45(5): 377–384.
10. Prokina, Kristina, Ilya S. Turbavov, Denis Tikhonenkov & Alexander P. Mylnikov. 2018 Free-living heterotrophic flagellates from bays of Sevastopol (the Black Sea littoral) Protistology 12(4): 202–222.
11. Prokina, Kristina, Ludmila V. Radaykina & Alexander P. Mylnikov. 2019 ЦЕНТРОХЕЛИДНЫЕ СОЛНЕЧНИКИ (CENTROPLASTHELIDA FEBVRE-CHEVALIER ET FEBVRE 1984) ВЬЕТНАМА Zoologicheskii Zhurnal 98(9): 965–977.
12. Strassert, Jurgen, Denis Tikhonenkov, Jean-François Pombert, Martin Kolisko, Vera Tai, Alexander P. Mylnikov & Patrick J. Keeling. 2016 Moramonas marocensis gen. nov., sp. nov., a jakobid flagellate isolated from desert soil with a bacteria-like, but bloated mitochondrial genome Open Biology 6(150239): 1-11.
13. Tikhonenkov, Denis, Jan Janouškovec, Alexander P. Mylnikov, Kirill Mikhailov, Timur G. Simdyanov, Vladimir V. Aleoshin & Patrick J. Keeling. 2014 Description of Colponema vietnamica sp.n. and Acavomonas peruviana n. gen. n. sp., two new Alveolate Phyla (Colponemidia nom. nov. and Acavomonidia nom. nov.) and their Contributions to Reconstructing the Ancestral State of Alveolates and Eukaryotes Public Library of Science, ONE 9(4): e95467.
14. Tikhonenkov, Denis, Jan Janouškovec, Patrick J. Keeling & Alexander P. Mylnikov. 2016 The Morphology, Ultrastructure and SSU rRNA Gene Sequence of a New Freshwater Flagellate, Neobodo borokensis n. sp. (Kinetoplastea, Excavata) Journal of Eukaryotic Microbiology 63(2): 220-232.
15. Tikhonenkov, Denis, Kirill Mikhailov, Elisabeth Hehenberger, Sergey Karpov, Kristina Prokina, Anton Esaulov, Olga Belyakova, Yuri Mazei, Alexander P. Mylnikov, Vladimir V. Aleoshin & Patrick J. Keeling. 2020 New lineage of microbial predators adds complexity to reconstructing the evolutionary origin of animals Current Biology.
16. Tikhonenkov, Denis, Kirill Mikhailov, Ryan M. R. Gawryluk, Artem Belyaev, Varsha Mathur, Sergery A. Karpov, Dmitry G. Zagumyonnyi, Anastasia Borodina, Kristina Prokina, Alexander P. Mylnikov, Vladimir V. Aleoshin & Patrick J. Keeling. 2022 Microbial predators form a new supergroup of eukaryotes Nature 612: 714-719.
17. Tikhonenkov, Denis, Mahwash Jamy, Anastasia Borodina, Artem Belyaev, Dmitry G. Zagumyonnyi, Kristina Prokina, Alexander P. Mylnikov, Fabien Burki & Sergey Karpov. 2022 On the origin of TSAR: morphology, diversity, and phylogeny of Telonemia Open Biology.
18. Tikhonenkov, Denis, Ryan M. R. Gawryluk, Alexander P. Mylnikov & Patrick J. Keeling. 2021 First finding of free-living representatives of Prokinetoplastina and their nuclear and mitochondrial genomes Scientific Reports.
19. Wylezich, Claudia, Alexander P. Mylnikov, Markus Weitere & Hartmut Arndt. 2007 Distribution and Phylogenetic Relationships of Freshwater Thaumatomonads with a Description of the New Species Thaumatomonas coloniensis n. sp. Journal of Eukaryotic Microbiology 54(4): 347-357.
20. Wylezich, Claudia, Sergery A. Karpov, Alexander P. Mylnikov, Ruth Anderson & Klaus Jürgens. 2012 Ecologically relevant choanoflagellates collected from hypoxic water masses of the Baltic Sea have untypical mitochondrial cristae BMC Microbiology 12: 271.